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Semantic Web

Author: Christopher J. O. Baker

Publisher: Springer Science & Business Media

Published: 2007-04-14

Total Pages: 449

ISBN-13: 0387484388

This book introduces advanced semantic web technologies, illustrating their utility and highlighting their implementation in biological, medical, and clinical scenarios. It covers topics ranging from database, ontology, and visualization to semantic web services and workflows. The volume also details the factors impacting on the establishment of the semantic web in life science and the legal challenges that will impact on its proliferation.

Web Resources for Bioinformatics, Biotechnology and and Life Sciences Research

Author: ajit roy

Publisher: CreateSpace

Published: 2015-04-21

Total Pages: 628

ISBN-13: 9781511869102

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There are thousands of bioinformatics and genomics resources that are free and publicly accessible. However, trying to find the right resource for your need, and learn how to use the often complex features and functions can be difficult. The book explores ways that you can quickly find and effectively learn how to use resources. It will include a tour of example resources, organized by categories such as Algorithms and Analysis tools, expression resources, genome browsers (General, Eukaryotic and Prokaryotic/Microbial), Literature and text mining resources, and resources focused on nucleotides, proteins, pathways, disease and variation. One can learn how to find resources with the OpenHelix free search interface. OpenHelix searches hundreds of genomics resources, tutorial suites, and other material to deliver the most relevant resources in seconds.

Bioinformatics - A Student's Companion

Author: Kalibulla Syed Ibrahim

Publisher: Springer

Published: 2017-05-02

Total Pages: 295

ISBN-13: 981101857X

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This manual offers a stand-alone reading companion, unique in simplifying the practical components of Bioinformatics in a unique and user-friendly manner. It covers the practical component of syllabi used at most leading universities and discusses the most extensively used tools and methodologies in Bioinformatics. Research in the biological sciences has made tremendous strides in recent years due in part to the increased automation in data generation. At the same time, storing, managing and interpreting huge volumes of data has become one of the most challenging tasks for scientists. These two aspects have ultimately necessitated the application of computers, giving rise to a highly interdisciplinary discipline–Bioinformatics. Despite the richness of bioinformatics resources and methods, the exposure of life sciences undergraduates and postgraduates to bioinformatics is extremely limited. Though the internet offers various tools for free, and provides guides for using them, it fails to help users interpret the processed data. Moreover, most sites fail to update their help pages to accommodate software upgrades. Though the market is flooded with books discussing the theoretical concepts in Bioinformatics, a manual of this kind is rarely found. The content developed to meet the needs of readers from diverse background and to incorporate the syllabi of undergraduate and postgraduate courses at various universities.

Plant Bioinformatics

Author: Khalid Rehman Hakeem

Publisher: Springer

Published: 2017-11-21

Total Pages: 459

ISBN-13: 3319671561

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This book: (i) introduces fundamental and applied bioinformatics research in the field of plant life sciences; (ii) enlightens the potential users towards the recent advances in the development and application of novel computational methods available for the analysis and integration of plant -omics data; (iii) highlights relevant databases, softwares, tools and web resources developed till date to make ease of access for researchers working to decipher plant responses towards stresses; and (iv) presents a critical cross-talks on the available high-throughput data in plant research. Therefore, in addition to being a reference for the professional researchers, it is also of great interest to students and their professors. Considering immense significance of plants for all lives on Earth, the major focus of research in plant biology has been to: (a) select plants that best fit the purposes of human, (b) develop crop plants superior in quality, quantity and farming practices when compared to natural (wild) plants, and (c) explore strategies to help plants to adapt biotic and abiotic/environmental stress factors. Accordingly the development of novel techniques and their applications have increased significantly in recent years. In particular, large amount of biological data have emerged from multi-omics approaches aimed at addressing numerous aspects of the plant systems under biotic or abiotic stresses. However, even though the field is evolving at a rapid pace, information on the cross-talks and/or critical digestion of research outcomes in the context of plant bioinformatics is scarce. “Plant Bioinformatics: Decoding the Phyta” is aimed to bridge this gap.

Bioinformatics

Author: National Research Council

Publisher: National Academies Press

Published: 2000-11-01

Total Pages: 54

ISBN-13: 0309171458

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The goal of this workshop was to bring together bioinformatics stake holders from government, academe, and industry for a day of presentations and dialogue. Fifteen experts identified and discussed some of the most important issues raised by the current flood of biologic data. Topics explored included the importance of database curation, database integration and interoperability, consistency and standards in terminology, error prevention and correction, data provenance, ontology, the importance of maintaining privacy, data mining, and the need for more computer scientists with specialty training in bioinformatics. Although formal conclusions and recommendations will not come from this particular workshop, many insights may be gleaned about the future of this field, from the context of the discussions and presentations described here.

Bioinformatics

Author: Ron D. Appel

Publisher: World Scientific

Published: 2009

Total Pages: 464

ISBN-13: 9812838783

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Biological research and recent technological advances have resulted in an enormous increase in research data that require large storage capacities, powerful computing resources, and accurate data analysis algorithms. Bioinformatics is the field that provides these resources to life science researchers. The Swiss Institute of Bioinformatics (SIB), which has celebrated its 10th anniversary in 2008, is an institution of national importance, recognized worldwide for its state-of-the-art work. Organized as a federation of bioinformatics research groups from Swiss universities and research institutes, the SIB provides services to the life science community that are highly appreciated worldwide, and coordinates research and education in bioinformatics nationwide. The SIB plays a central role in life science research both in Switzerland and abroad by developing extensive and high-quality bioinformatics resources that are essential for all life scientists. Knowledge developed by SIB members in areas such as genomics, proteomics, and systems biology is directly transformed by academia and industry into innovative solutions to improve global health. Such an astounding concentration of talent in a given field is unusual and unique in Switzerland. This book provides an insight into some of the key areas of activity in bioinformatics in Switzerland. With contributions from SIB members, it covers both research work and major infrastructure efforts in genome and gene expression analysis, investigations on proteins and proteomes, evolutionary bioinformatics, and modeling of biological systems.

Practical Guide to Life Science Databases

Author: Imad Abugessaisa

Publisher: Springer Nature

Published: 2022-01-06

Total Pages: 228

ISBN-13: 9811658129

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This book provides the latest information of life science databases that center in the life science research and drive the development of the field. It introduces the fundamental principles, rationales and methodologies of creating and updating life science databases. The book brings together expertise and renowned researchers in the field of life science databases and brings their experience and tools at the fingertips of the researcher. The book takes bottom-up approach to explain the structure, content and the usability of life science database. Detailed explanation of the content, structure, query and data retrieval are discussed to provide practical use of life science database and to enable the reader to use database and provided tools in practice. The readers will learn the necessary knowledge about the untapped opportunities available in life science databases and how it could be used so as to advance basic research and applied research findings and transforming them to the benefit of human life. Chapter 2 is available open access under a Creative Commons Attribution 4.0 International License via link.springer.com.

Bioinformatics for Everyone

Author: Mohammad Yaseen Sofi

Publisher: Academic Press

Published: 2021-09-14

Total Pages: 268

ISBN-13: 0323911293

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Bioinformatics for Everyone provides a brief overview on currently used technologies in the field of bioinformatics—interpreted as the application of information science to biology— including various online and offline bioinformatics tools and softwares. The book presents valuable knowledge in a simplified way to help students and researchers easily apply bioinformatics tools and approaches to their research and lab routines. Several protocols and case studies that can be reproduced by readers to suit their needs are also included. Explains the most relevant bioinformatics tools available in a didactic manner so that readers can easily apply them to their research Includes several protocols that can be used in different types of research work or in lab routines Discusses upcoming technologies and their impact on biological/biomedical sciences

Bioinformatics Computing

Author: Bryan P. Bergeron

Publisher: Prentice Hall Professional

Published: 2003

Total Pages: 472

ISBN-13: 9780131008250

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Comprehensive and concise, this handbook has chapters on computing visualization, large database designs, advanced pattern matching and other key bioinformatics techniques. It is a practical guide to computing in the growing field of Bioinformatics--the study of how information is represented and transmitted in biological systems, starting at the molecular level.

Bioinformatics Links Directory

Author:

Publisher:

Published: 2008

Total Pages:

ISBN-13:

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De Bioinformatics Links Directory bevat links naar alle web servers op het gebied van life sciences die worden besproken in het tijdschrift Nucleic Acids Research, en naar andere nuttige tools, databestanden en bronnen voor bioinformatica en moleculair biologisch onderzoek. Het bevat meer dan 1200 links.The Bioinformatics Links Directory, is an online resource for public access to all of the life science research web servers published in issues of Nucleic Acids Research, together with other useful tools, databases and resources for bioinformatics and molecular biology research. It contains over 1200 links and, dependent on community input and development, exemplifies an open access research tool and resource.