Comparative Gene Finding

Comparative Gene Finding PDF

Author: Marina Axelson-Fisk

Publisher: Springer

Published: 2015-04-13

Total Pages: 396

ISBN-13: 1447166930

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This book presents a guide to building computational gene finders, and describes the state of the art in computational gene finding methods, with a focus on comparative approaches. Fully updated and expanded, this new edition examines next-generation sequencing (NGS) technology. The book also discusses conditional random fields, enhancing the broad coverage of topics spanning probability theory, statistics, information theory, optimization theory and numerical analysis. Features: introduces the fundamental terms and concepts in the field; discusses algorithms for single-species gene finding, and approaches to pairwise and multiple sequence alignments, then describes how the strengths in both areas can be combined to improve the accuracy of gene finding; explores the gene features most commonly captured by a computational gene model, and explains the basics of parameter training; illustrates how to implement a comparative gene finder; examines NGS techniques and how to build a genome annotation pipeline.

Encyclopedia of Bioinformatics and Computational Biology

Encyclopedia of Bioinformatics and Computational Biology PDF

Author:

Publisher: Elsevier

Published: 2018-08-21

Total Pages: 3421

ISBN-13: 0128114320

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Encyclopedia of Bioinformatics and Computational Biology: ABC of Bioinformatics, Three Volume Set combines elements of computer science, information technology, mathematics, statistics and biotechnology, providing the methodology and in silico solutions to mine biological data and processes. The book covers Theory, Topics and Applications, with a special focus on Integrative –omics and Systems Biology. The theoretical, methodological underpinnings of BCB, including phylogeny are covered, as are more current areas of focus, such as translational bioinformatics, cheminformatics, and environmental informatics. Finally, Applications provide guidance for commonly asked questions. This major reference work spans basic and cutting-edge methodologies authored by leaders in the field, providing an invaluable resource for students, scientists, professionals in research institutes, and a broad swath of researchers in biotechnology and the biomedical and pharmaceutical industries. Brings together information from computer science, information technology, mathematics, statistics and biotechnology Written and reviewed by leading experts in the field, providing a unique and authoritative resource Focuses on the main theoretical and methodological concepts before expanding on specific topics and applications Includes interactive images, multimedia tools and crosslinking to further resources and databases

4th International Conference on Biomedical Engineering in Vietnam

4th International Conference on Biomedical Engineering in Vietnam PDF

Author: Vo Van Toi

Publisher: Springer Science & Business Media

Published: 2012-09-20

Total Pages: 425

ISBN-13: 3642321836

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This volume presents the proceedings of the Fourth International Conference on the Development of Biomedical Engineering in Vietnam which was held in Ho Chi Minh City as a Mega-conference. It is kicked off by the Regenerative Medicine Conference with the theme “BUILDING A FACE” USING A REGENERATIVE MEDICINE APPROACH”, endorsed mainly by the Tissue Engineering and Regenerative Medicine International Society (TERMIS). It is followed by the Computational Medicine Conference, endorsed mainly by the Computational Surgery International Network (COSINE) and the Computational Molecular Medicine of German National Funding Agency; and the General Biomedical Engineering Conference, endorsed mainly by the International Federation for Medical and Biological Engineering (IFMBE). It featured the contributions of 435 scientists from 30 countries, including: Australia, Austria, Belgium, Canada, China, Finland, France, Germany, Hungary, India, Iran, Italy, Japan, Jordan, Korea, Malaysia, Netherlands, Pakistan, Poland, Russian Federation, Singapore, Spain, Switzerland, Taiwan, Turkey, Ukraine, United Kingdom, United States, Uruguay and Viet Nam.

Adaptive and Natural Computing Algorithms

Adaptive and Natural Computing Algorithms PDF

Author: Bartlomiej Beliczynski

Publisher: Springer

Published: 2007-07-03

Total Pages: 854

ISBN-13: 3540716181

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This two volume set constitutes the refereed proceedings of the 8th International Conference on Adaptive and Natural Computing Algorithms, ICANNGA 2007, held in Warsaw, Poland, in April 2007. Coverage in the first volume includes evolutionary computation, genetic algorithms, and particle swarm optimization. The second volume covers neural networks, support vector machines, biomedical signal and image processing, biometrics, computer vision.

Engineering Applications of Neural Networks

Engineering Applications of Neural Networks PDF

Author: Chrisina Jayne

Publisher: Springer

Published: 2013-04-19

Total Pages: 506

ISBN-13: 3642329098

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This book constitutes the refereed proceedings of the 13th International Conference on Engineering Applications of Neural Networks, EANN 2012, held in London, UK, in September 2012. The 49 revised full papers presented were carefully reviewed and selected from numerous submissions. The papers describe the applications of neural networks and other computational intelligence approaches to intelligent transport, environmental engineering, computer security, civil engineering, financial forecasting, virtual learning environments, language interpretation, bioinformatics and general engineering.

Plant-Microbe Interactions

Plant-Microbe Interactions PDF

Author: Jagajjit Sahu

Publisher: CRC Press

Published: 2022-07-28

Total Pages: 324

ISBN-13: 1000613941

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A constant research effort to understand plant-microbe interactions makes it indispensable to keep abreast of the latest research developments. Researchers from a range of disciplines have used multiple approaches to infer this field. With the advent of next-generation techniques, both molecular and computational, the field has entered a new phase. These approaches often result in massive information, which is sometimes tangled and in need of further analysis. These types of analyses also require cutting-edge data analytics as well as efficient statistical models. Plant-Microbe Interactions: Harnessing Next-Generation Molecular Technologies for Sustainable Agriculture provides a comprehensive picture of the modern-day analytics and approaches being used to provide insights into the interactions between plant and microbe. A wide range of technologies are explored along with practical guides toward these techniques. A detailed understanding of omics data in various areas could be obtained from this compilation. Key Features: • Crosstalk between plant and microbe • Overview of advanced molecular techniques used to study plant-microbe interaction • Practical guide to technologies such as NGS • Omics data analysis used to study plant-microbe interaction • Role of soil metagenomics • Advanced technologies such as nanotechnology and CRISPR serving to study plant-microbe interaction This book will serve as a great reference to various next-generation techniques in the field of plant-microbe interaction, thereby helping to better understand the mechanism. This will also help budding researchers to shape their research in similar areas.

Applications of Evolutionary Computation

Applications of Evolutionary Computation PDF

Author: Kevin Sim

Publisher: Springer

Published: 2018-03-07

Total Pages: 917

ISBN-13: 3319775383

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This book constitutes the refereed conference proceedings of the 21st International Conference on the Applications of Evolutionary Computation, EvoApplications 2018, held in Parma, Italy, in April 2018, collocated with the Evo* 2018 events EuroGP, EvoCOP, and EvoMUSART. The 59 revised full papers presented were carefully reviewed and selected from 84 submissions. EvoApplications 2018 combined research from 14 different domains: business analytics and finance (EvoBAFIN); computational biology (EvoBIO); communication networks and other parallel and distributed systems (EvoCOMNET); complex systems (EvoCOMPLEX); energy-related optimization (EvoENERGY); games and multi-agent systems (EvoGAMES); image analysis, signal processing and pattern recognition (EvoIASP); realworld industrial and commercial environments (EvoINDUSTRY); knowledge incorporation in evolutionary computation (EvoKNOW); continuous parameter optimization (EvoNUM); parallel architectures and distributed infrastructures (EvoPAR); evolutionary robotics (EvoROBOT); nature-inspired algorithms in software engineering and testing (EvoSET); and stochastic and dynamic environments (EvoSTOC).

Rough Sets, Fuzzy Sets, Data Mining, and Granular Computing

Rough Sets, Fuzzy Sets, Data Mining, and Granular Computing PDF

Author: Dominik Slezak

Publisher: Springer

Published: 2005-09-14

Total Pages: 760

ISBN-13: 3540318240

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This volume contains the papers selected for presentation at the 10th Int- national Conference on Rough Sets, Fuzzy Sets, Data Mining, and Granular Computing, RSFDGrC 2005, organized at the University of Regina, August 31st–September 3rd, 2005. This conference followed in the footsteps of inter- tional events devoted to the subject of rough sets, held so far in Canada, China, Japan,Poland,Sweden, and the USA. RSFDGrC achievedthe status of biennial international conference, starting from 2003 in Chongqing, China. The theory of rough sets, proposed by Zdzis law Pawlak in 1982, is a model of approximate reasoning. The main idea is based on indiscernibility relations that describe indistinguishability of objects. Concepts are represented by - proximations. In applications, rough set methodology focuses on approximate representation of knowledge derivable from data. It leads to signi?cant results in many areas such as ?nance, industry, multimedia, and medicine. The RSFDGrC conferences put an emphasis on connections between rough sets and fuzzy sets, granularcomputing, and knowledge discoveryand data m- ing, both at the level of theoretical foundations and real-life applications. In the case of this event, additional e?ort was made to establish a linkage towards a broader range of applications. We achieved it by including in the conference program the workshops on bioinformatics, security engineering, and embedded systems, as well as tutorials and sessions related to other application areas.