Quantitative Trait Loci Analysis in Animals

Quantitative Trait Loci Analysis in Animals PDF

Author: Joel Ira Weller

Publisher: CABI

Published: 2009

Total Pages: 288

ISBN-13: 1845937341

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Quantitative Trait Loci (QTL) is a topic of major agricultural significance for efficient livestock production. This book covers various statistical methods that have been used or proposed for detection and analysis of QTL and marker-and gene-assisted selection in animal genetics and breeding.

Bioinformatics in Aquaculture

Bioinformatics in Aquaculture PDF

Author: Zhanjiang (John) Liu

Publisher: John Wiley & Sons

Published: 2017-04-17

Total Pages: 605

ISBN-13: 1118782356

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Bioinformatics derives knowledge from computer analysis of biological data. In particular, genomic and transcriptomic datasets are processed, analysed and, whenever possible, associated with experimental results from various sources, to draw structural, organizational, and functional information relevant to biology. Research in bioinformatics includes method development for storage, retrieval, and analysis of the data. Bioinformatics in Aquaculture provides the most up to date reviews of next generation sequencing technologies, their applications in aquaculture, and principles and methodologies for the analysis of genomic and transcriptomic large datasets using bioinformatic methods, algorithm, and databases. The book is unique in providing guidance for the best software packages suitable for various analysis, providing detailed examples of using bioinformatic software and command lines in the context of real world experiments. This book is a vital tool for all those working in genomics, molecular biology, biochemistry and genetics related to aquaculture, and computational and biological sciences.

Quantitative Trait Loci

Quantitative Trait Loci PDF

Author: Nicola J. Camp

Publisher: Springer Science & Business Media

Published: 2008-02-03

Total Pages: 362

ISBN-13: 1592591760

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In Quantitative Trait Loci: Methods and Protocols, a panel of highly experienced statistical geneticists demonstrate in a step-by-step fashion how to successfully analyze quantitative trait data using a variety of methods and software for the detection and fine mapping of quantitative trait loci (QTL). Writing for the nonmathematician, these experts guide the investigator from the design stage of a project onwards, providing detailed explanations of how best to proceed with each specific analysis, to find and use appropriate software, and to interpret results. Worked examples, citations to key papers, and variations in method ease the way to understanding and successful studies. Among the cutting-edge techniques presented are QTDT methods, variance components methods, and the Markov Chain Monte Carlo method for joint linkage and segregation analysis.

Statistical Genetics of Quantitative Traits

Statistical Genetics of Quantitative Traits PDF

Author: Rongling Wu

Publisher: Springer Science & Business Media

Published: 2007-07-17

Total Pages: 371

ISBN-13: 038768154X

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This book introduces the basic concepts and methods that are useful in the statistical analysis and modeling of the DNA-based marker and phenotypic data that arise in agriculture, forestry, experimental biology, and other fields. It concentrates on the linkage analysis of markers, map construction and quantitative trait locus (QTL) mapping, and assumes a background in regression analysis and maximum likelihood approaches. The strength of this book lies in the construction of general models and algorithms for linkage analysis, as well as in QTL mapping in any kind of crossed pedigrees initiated with inbred lines of crops.

Genetics and Analysis of Quantitative Traits

Genetics and Analysis of Quantitative Traits PDF

Author: Michael Lynch

Publisher: Sinauer Associates Incorporated

Published: 1998-01

Total Pages: 980

ISBN-13: 9780878934812

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Professors Lynch and Walsh bring together the diverse array of theoretical and empirical applications of quantitative genetics in a work that is comprehensive and accessible to anyone with a rudimentary understanding of statistics and genetics.

Oryza: From Molecule to Plant

Oryza: From Molecule to Plant PDF

Author: Takuji Sasaki

Publisher: Springer Science & Business Media

Published: 2012-12-06

Total Pages: 242

ISBN-13: 9401157944

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Recent studies have shown that despite gross differences in genome size, the gene order in the cereal genomes has remained remarkably similar. This observation implies that the small genome of rice will reflect the basic structure of the cereal genomes. Rice will therefore become an important tool for all cereal geneticists/molecular biologists as information generated by rice breeders/geneticists/molecular biologists becomes combined in databases with that generated by researchers studying other cereals. Rice research will therefore be of interest to all cereal breeders/geneticists/molecular biologists. This Edition reviews the current state of knowledge of its genome, genes, germplasm collections, trait analysis, breeding systems, mutator systems, transformation and diseases.

Quantitative Trait Loci (QTL)

Quantitative Trait Loci (QTL) PDF

Author: Scott A. Rifkin

Publisher: Humana Press

Published: 2012-05-09

Total Pages: 0

ISBN-13: 9781617797842

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Over the last two decades advances in genotyping technology, and the development of quantitative genetic analytical techniques have made it possible to dissect complex traits and link quantitative variation in traits to allelic variation on chromosomes or quantitative trait loci (QTLs). In Quantitative Trait Loci (QTLs):Methods and Protocols, expert researchers in the field detail methods and techniques that focus on specific components of the entire process of quantitative train loci experiments. These include methods and techniques for the mapping populations, identifying quantitative trait loci, extending the power of quantitative trait locus analysis, and case studies. Written in the highly successful Methods in Molecular BiologyTM series format, the chapters include the kind of detailed description and implementation advice that is crucial for getting optimal results in the laboratory. Thorough and intuitive, Quantitative Trait Loci (QTLs):Methods and Protocols aids scientists in the further study of the links between phenotypic and genotypic variation in fields from medicine to agriculture, from molecular biology to evolution to ecology.

Statistical Genomics

Statistical Genomics PDF

Author: Ben Hui Liu

Publisher: CRC Press

Published: 2017-11-22

Total Pages: 642

ISBN-13: 1351414534

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Genomics, the mapping of the entire genetic complement of an organism, is the new frontier in biology. This handbook on the statistical issues of genomics covers current methods and the tried-and-true classical approaches.

Genomic Selection in Animals

Genomic Selection in Animals PDF

Author: Joel Weller

Publisher: John Wiley & Sons

Published: 2016-01-04

Total Pages: 192

ISBN-13: 1119213614

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The field of whole genome selection has quickly developed into the breeding methodology of the future. As efforts to map a wide variety of animal genomes have matured and full animal genomes are now available for many animal scientists and breeders are looking to apply these techniques to livestock production. Providing a comprehensive, forward-looking review of animal genomics, Genomic Selection in Animals provides coverage of genomic selection in a variety of economically important species including cattle, swine, and poultry. The historical foundations of genomic selection are followed by chapters that review and assess current techniques. The final chapter looks toward the future and what lies ahead for field as application of genomic selection becomes more widespread. A concise, useful summary of the field by one of the world’s leading researchers, Genomic Selection in Animals fills an important gap in the literature of animal breeding and genomics.