Natural Language Processing in Biomedicine

Natural Language Processing in Biomedicine PDF

Author: Hua Xu

Publisher: Springer

Published: 2024-05-27

Total Pages: 0

ISBN-13: 9783031558641

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This textbook covers broad topics within the application of natural language processing (NLP) in biomedicine, and provides in-depth review of the NLP solutions that reveal information embedded in biomedical text. The need for biomedical NLP research and development has grown rapidly in the past two decades as an important field in cognitive informatics. Natural Language Processing in Biomedicine: A Practical Guide introduces the history of the biomedical NLP field and takes the reader through the basic aspects of NLP including different levels of linguistic information and widely used machine learning and deep learning algorithms. The book details common biomedical NLP tasks, such as named entity recognition, concept normalization, relation extraction, text classification, information retrieval, and question answering. The book illustrates the tasks with real-life use cases and introduces real-world datasets, novel machine learning and deep learning algorithms, and large language models. Relevant resources for corpora and medical terminologies are also introduced. The final chapters are devoted to discussing applications of biomedical NLP in healthcare and life sciences. This textbook therefore represents essential reading for students in biomedical informatics programs, as well as for professionals who are conducting research or building biomedical NLP systems.

Biomedical Natural Language Processing

Biomedical Natural Language Processing PDF

Author: Kevin Bretonnel Cohen

Publisher: John Benjamins Publishing Company

Published: 2014-02-15

Total Pages: 174

ISBN-13: 9027271062

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Biomedical Natural Language Processing is a comprehensive tour through the classic and current work in the field. It discusses all subjects from both a rule-based and a machine learning approach, and also describes each subject from the perspective of both biological science and clinical medicine. The intended audience is readers who already have a background in natural language processing, but a clear introduction makes it accessible to readers from the fields of bioinformatics and computational biology, as well. The book is suitable as a reference, as well as a text for advanced courses in biomedical natural language processing and text mining.

Statistical Language Learning

Statistical Language Learning PDF

Author: Eugene Charniak

Publisher: MIT Press

Published: 1996

Total Pages: 196

ISBN-13: 9780262531412

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This text introduces statistical language processing techniques--word tagging, parsing with probabilistic context free grammars, grammar induction, syntactic disambiguation, semantic word classes, word-sense disambiguation--along with the underlying mathematics and chapter exercises.

Methods in Biomedical Informatics

Methods in Biomedical Informatics PDF

Author: Indra Neil Sarkar

Publisher: Academic Press

Published: 2013-09-03

Total Pages: 589

ISBN-13: 0124016847

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Beginning with a survey of fundamental concepts associated with data integration, knowledge representation, and hypothesis generation from heterogeneous data sets, Methods in Biomedical Informatics provides a practical survey of methodologies used in biological, clinical, and public health contexts. These concepts provide the foundation for more advanced topics like information retrieval, natural language processing, Bayesian modeling, and learning classifier systems. The survey of topics then concludes with an exposition of essential methods associated with engineering, personalized medicine, and linking of genomic and clinical data. Within an overall context of the scientific method, Methods in Biomedical Informatics provides a practical coverage of topics that is specifically designed for: (1) domain experts seeking an understanding of biomedical informatics approaches for addressing specific methodological needs; or (2) biomedical informaticians seeking an approachable overview of methodologies that can be used in scenarios germane to biomedical research. Contributors represent leading biomedical informatics experts: individuals who have demonstrated effective use of biomedical informatics methodologies in the real-world, high-quality biomedical applications Material is presented as a balance between foundational coverage of core topics in biomedical informatics with practical "in-the-trenches" scenarios. Contains appendices that function as primers on: (1) Unix; (2) Ruby; (3) Databases; and (4) Web Services.

The Form of Information in Science

The Form of Information in Science PDF

Author: Z. Harris

Publisher: Springer Science & Business Media

Published: 1988-12-31

Total Pages: 622

ISBN-13: 9789027725165

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DOES DISCOURSE HAVE A 'STRUCTURE'? HARRIS'S REVOLUTION IN LINGUISTICS As a freshman back in 1947 I discovered that within the various academic divisions and subdivisions of the University of Pennsylvania there existed a something (it was not a Department, but a piece of the Anthropology Department) called 'Linguistic Analysis'. I was an untalented but enthusiastic student of Greek and a slightly more talented student of German, as well as the son of a translator, so the idea of 'Linguistic Analysis' attracted me, sight unseen, and I signed up for a course. It turned out that 'Linguistic Analysis' was essentially a graduate program - I and another undergraduate called Noam Chomsky were the only two undergraduates who took courses in Linguistic Analysis - and also that it was essentially a one-man show: a professor named Zellig Harris taught all the courses with the aid of graduate Teaching Fellows (and possibly - I am not sure - one Assistant Professor). The technicalities of Linguistic Analysis were formidable, and I never did master them all. But the powerful intellect and personality of Zellig Harris drew me like a lodestone, and, although I majored in Philosophy, I took every course there was to take in Linguistic Analysis from then until my gradua tion. What 'Linguistics' was like before Zellig Harris is something not many people care to remember today.

Natural Language Processing In Healthcare

Natural Language Processing In Healthcare PDF

Author: Satya Ranjan Dash

Publisher: CRC Press

Published: 2022-09-13

Total Pages: 227

ISBN-13: 1000624692

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Natural Language Processing In Healthcare: A Special Focus on Low Resource Languages covers the theoretical and practical aspects as well as ethical and social implications of NLP in healthcare. It showcases the latest research and developments contributing to the rising awareness and importance of maintaining linguistic diversity. The book goes on to present current advances and scenarios based on solutions in healthcare and low resource languages and identifies the major challenges and opportunities that will impact NLP in clinical practice and health studies.

Biomedical Informatics

Biomedical Informatics PDF

Author: Edward H. Shortliffe

Publisher: Springer Science & Business Media

Published: 2006-12-02

Total Pages: 1060

ISBN-13: 0387362789

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This book focuses on the role of computers in the provision of medical services. It provides both a conceptual framework and a practical approach for the implementation and management of IT used to improve the delivery of health care. Inspired by a Stanford University training program, it fills the need for a high quality text in computers and medicine. It meets the growing demand by practitioners, researchers, and students for a comprehensive introduction to key topics in the field. Completely revised and expanded, this work includes several new chapters filled with brand new material.

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