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Molecular Techniques in Taxonomy

Author: Godfrey M. Hewitt

Publisher: Springer Science & Business Media

Published: 2013-06-29

Total Pages: 404

ISBN-13: 3642839622

Taxonomy is fundamental to understanding the variety of life forms, and exciting expansions in molecular biology are re- volutionising the obtained data. This volume reviews the ma- jor molecular biological techniques that are applied in ta- xonomy. The chapters are arranged in three main sections:1) Overviews of important topics in molecular taxonomy; 2) Case studies of the successful application of molecular methods to taxonomic and evolutionary questions; 3) Protocols for a range of generally applicable methods. The described techni- ques include DNA-DNA hybridization, DNA fingerprinting, RFLP analysis, and PCR sequencing.

Molecular Plant Taxonomy

Author: Pascale Besse

Publisher: Humana

Published: 2014-01-11

Total Pages: 0

ISBN-13: 9781627037662

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Plant taxonomy is an ancient discipline facing new challenges with the current availability of a vast array of molecular approaches which allow reliable genealogy-based classifications. Although the primary focus of plant taxonomy is on the delimitation of species, molecular approaches also provide a better understanding of evolutionary processes, a particularly important issue for some taxonomic complex groups. Molecular Plant Taxonomy: Methods and Protocols describes laboratory protocols based on the use of nucleic acids and chromosomes for plant taxonomy, as well as guidelines for phylogenetic analysis of molecular data. Experts in the field also contribute review and application chapters that will encourage the reader to develop an integrative taxonomy approach, combining nucleic acid and cytogenetic data together with other crucial information (taxonomy, morphology, anatomy, ecology, reproductive biology, biogeography, paleobotany), which will help not only to best circumvent species delimitation but also to resolve the evolutionary processes in play. Written in the successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible protocols, and notes on troubleshooting and avoiding known pitfalls. Authoritative and easily accessible, Molecular Plant Taxonomy: Methods and Protocols seeks to provide conceptual as well as technical guidelines to plant taxonomists and geneticists.

Molecular Plant Taxonomy

Author: Pascale Besse

Publisher: Humana

Published: 2021-12-25

Total Pages: 400

ISBN-13: 9781071609996

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This fully updated edition explores conceptual as well as technical guidelines for plant taxonomists and geneticists, such as the increasing use of next-generation sequencing (NGS) technologies for numerous applications in plant taxonomy. The volume provides molecular approaches to be used within an “integrative taxonomy” framework, combining a range of nucleic acid and cytogenetic data together with other crucial information (taxonomy, morphology, anatomy, ecology, reproductive biology, biogeography, paleobotany, etc.), which will help not only to best circumvent species delimitation but also to resolve the evolutionary processes in play. Written for the highly successful Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and up-to-date, Molecular Plant Taxonomy: Methods and Protocols, Second Edition is an ideal guide for researchers seeking a better understanding of evolutionary processes, at species and population level, through molecular techniques.

Molecular Systematics of Plants

Author: Pamela S. Soltis

Publisher: Springer Science & Business Media

Published: 2012-12-06

Total Pages: 446

ISBN-13: 1461532760

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The application of molecular techniques is rapidly transforming the study of plant systematics. The precision they offer enables researchers to classify plants that have not been subject to rigorous classification before and thus allows them to obtain a clearer picture of evolutionary relationships. Plant Molecular Systematics is arranged both conceptually and phylogenetically to accommodate the interests not only of general systematists, but also those of people interested in a particular plant family. The first part discusses molecular sequencing; the second reviews restriction site analysis and the sequencing of mitochondrial DNA. A third section details the analysis of ribosomal DNA and chloroplast DNA. The following section introduces model studies involving well-studied families such as the Onagraceae, Compositae and Leguminosae. The book concludes with a section addressing theoretical topics such as data analysis and the question of morphological vs. molecular data.

Molecular Systematics of Plants II

Author: Pamela Soltis

Publisher: Springer Science & Business Media

Published: 2012-12-06

Total Pages: 586

ISBN-13: 1461554195

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In the five years since the publication of Molecular Systematics of Plants, the field of molecular systematics has advanced at an astonishing pace. This period has been marked by a volume of new empirical data and advances in theoretical and analytical issues related to DNA. Comparative DNA sequencing, facilitated by the amplification of DNA via the polymerase chain reaction (PCR), has become the tool of choice for molecular systematics. As a result, large portions of the Molecular Systematics of Plants have become outdated. Molecular Systematics of Plants II summarizes these recent achievements in plant molecular systematics. Like its predecessor, this completely revised work illustrates the potential of DNA markers for addressing a wide variety of phylogenetic and evolutionary questions. The volume provides guidance in choosing appropriate techniques, as well as appropriate genes for sequencing, for given levels of systematic inquiry. More than a review of techniques and previous work, Molecular Systematics of Plants II provides a stimulus for developing future research in this rapidly evolving field. Molecular Systematics of Plants II is not only written for systematists (faculty, graduate students, and researchers), but also for evolutionary biologists, botanists, and paleobotanists interested in reviewing current theory and practice in plant molecular systematics.

Molecular Systematics of Fishes

Author: Thomas D. Kocher

Publisher: Elsevier

Published: 1997-07-10

Total Pages: 329

ISBN-13: 0080536913

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Sequenced biological macromolecules have revitalized systematic studies of evolutionary history. Molecular Systematics of Fishes is the first authoritative overview of the theory and application of these sequencing data to fishes. This volume explores the phylogeny of fishes at multiple taxonomic levels, uses methods of analysis of molecular data that apply both within and between fish populations, and employs molecule-based phylogenies to address broader questions of evolution. Targeted readers include ichthyologists, marine scientists, and all students, faculty, and researchers interested in fish evolution and ecology and vertebrate systematics. Focuses on the phylogeny and evolutionary biology of fishes Contains phylogenies of fishes at multiple taxonomic levels Applies molecule-based phylogenies to broader questions of evolution Includes methods for critique of analysis of molecular data

Rhizoctonia Species: Taxonomy, Molecular Biology, Ecology, Pathology and Disease Control

Author: B. Sneh

Publisher: Springer Science & Business Media

Published: 2013-06-29

Total Pages: 561

ISBN-13: 9401729018

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Rhizoctonia Species: Taxonomy, Molecular Biology, Ecology, Pathology and Control, written by the world's most reputable experts in their respective fields of Rhizoctonia research, summarizes years of research in the various aspects of the ubiquitous complex group of soil-borne fungi belonging to the anamorph genus Rhizoctonia. Species of Rhizoctonia worldwide cause economically important diseases on most of the world's important plants such as cereals, potato, cotton, sugarbeet, vegetables, ornamentals and trees in nurseries. The subject reviews covered in the book include classic as well as modern approaches to Rhizoctonia research in: Taxonomy and Evolution, Genetics and Pathogenicity, Plant-Rhizoctonia Interactions, Ecology, Population and Disease Dynamics, Disease Occurrence and Management in Various Crops, Cultural Control, Biological Control, Germplasm for Resistance, Chemical and Integrated Control Strategies. It aims to be the standard reference source book on Rhizoctonia for the next decade or more, just as Parmeter et al. (1970) has been in the past. It will be an important publication for Rhizoctonia investigators, plant pathologists, students, extension specialists, crop producers and companies dealing with plant disease control.

Bacterial Diversity and Systematics

Author: F.G. Priest

Publisher: Springer Science & Business Media

Published: 2012-12-06

Total Pages: 329

ISBN-13: 1461518695

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Bacterial taxonomy as a specialized discipline is practised by a minority but the applications of taxonomy are important to most, if not all microbiologists. It is the implementation of taxonomic ideas and practises which gives rise to identification and typing systems, procedures for the analysis and characterization of biodiversity, hypotheses about the evolution of micro-organisms, and improved procedures for the isolation and implementation of bacteria in biotechnological processes. Without taxonomic theory providing a sound basis to these many facets of microbiology there would be severe problems faced by many scientists working with micro-organisms. Taxonomy comprises three sequential but independent processes; classification, nomenclature and identification. The first two stages are the prime concern of the specialist taxonomist but the third stage should result in identification schemes of value to all microbiologists. As the classification and identification of micro-organisms improves, largely due to the introduction of new technologies, so does its contribution to the subject as a whole. It therefore seemed timely to hold a conference in the autumn of 1993 devoted to microbial identification. Such a topic could not be addressed without some reference to the enabling discipline of classification, but the principal aims were to assess improvements in identification and typing and how these were benefiting microbiological topics ranging from ecological and biotechnological studies of extremophilic bacteria to the use of pyrolysis mass spectrometry in epidemiology. The meeting, which was held in Granada, Spain, was supported by FEMS (FEMS Symposium No.

Principles and Techniques of Contemporary Taxonomy

Author: Donald L.J. Quicke

Publisher: Springer Science & Business Media

Published: 2013-03-13

Total Pages: 323

ISBN-13: 9401121346

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Taxonomy is an ever-changing, controversial and exCitmg field of biology. It has not remained motionless since the days of its founding fathers in the last century, but, just as with other fields of endeavour, it continues to advance in leaps and bounds, both in procedure and in philosophy. These changes are not only of interest to other taxonomists, but have far reaching implications for much of the rest of biology, and they have the potential to reshape a great deal of current biological thought, because taxonomy underpins much of biological methodology. It is not only important that an ethologist. physiologist. biochemist or ecologist can obtain information about the identities of the species which they are investigating; biology is also uniquely dependent on the comparative method and on the need to generalize. Both of these necessitate knowledge of the evolutionary relationships between organisms. and it is the science of taxonomy that can develop testable phylogenetic hypotheses and ultimately provide the best estimates of evolutionary history and relationships.

Molecular Systematics

Author: David M. Hillis

Publisher: Sinauer Associates, Incorporated

Published: 1996

Total Pages: 686

ISBN-13:

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Sampling. Project design. Collection and storage of tissues. Molecular techniques. Proteins: isozyme electrophoresis. Chromosomes: molecular cytogenetics. Nucleic acids I: DNA-DNA hybridization. Nucleic acids II: the polymerase chain reaction. Nucleic acids III: analysis of fragments and restriction sites. Nucleic acids IV: sequencing and cloning. Analysis. Intraspecific differentiation. Phylogenetic inference. Applications of molecular systematics: the state of the field and a look to the future.