Next Steps for Functional Genomics

Next Steps for Functional Genomics PDF

Author: National Academies of Sciences, Engineering, and Medicine

Publisher: National Academies Press

Published: 2020-12-18

Total Pages: 201

ISBN-13: 0309676738

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One of the holy grails in biology is the ability to predict functional characteristics from an organism's genetic sequence. Despite decades of research since the first sequencing of an organism in 1995, scientists still do not understand exactly how the information in genes is converted into an organism's phenotype, its physical characteristics. Functional genomics attempts to make use of the vast wealth of data from "-omics" screens and projects to describe gene and protein functions and interactions. A February 2020 workshop was held to determine research needs to advance the field of functional genomics over the next 10-20 years. Speakers and participants discussed goals, strategies, and technical needs to allow functional genomics to contribute to the advancement of basic knowledge and its applications that would benefit society. This publication summarizes the presentations and discussions from the workshop.

Developmental Genetics of the Flower

Developmental Genetics of the Flower PDF

Author:

Publisher: Elsevier

Published: 2006-09-29

Total Pages: 616

ISBN-13: 9780080464633

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Current major interests in this area include the study of higher level phylogenetic relationships and character evolution in the angiosperms, floral evolution, the genetic basis of key floral differences in basal angiosperms, the genetic and genomic consequences of polyploid speciation, conservation genetics of rare plant species, and phylogeography. Developmental Genetics of the Flower provides a series of papers focused on the developmental genetics of flowering as well as the genetic control of the timing of flowering. Investigation of speciational mechanisms, evolutionary relationships, and character evolution in flowering plants and land plants utilizing a variety of experimental approaches are discussed. The chapters are excellent reviews of the current fast-moving area of research. Provides a brief review of genes known to regulate flower development Articles emphasize the classic ABC model of flower development

From Functional Genomics to Biotechnology in Ornamental Plants

From Functional Genomics to Biotechnology in Ornamental Plants PDF

Author: Swee-Suak Ko

Publisher: Frontiers Media SA

Published: 2019-07-12

Total Pages: 179

ISBN-13: 2889459063

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For centuries plants of a broad taxonomical background have been bred and commercialized because of the beauty of their flowers. However, until recently genomic analyses of ornamentals remained a challenge because of their large genome sizes and high ploidy levels. In the last decade, increasingly affordable sequencing technologies and powerful bioinformatic approaches resulted in the complete sequencing of several horticultural species genomes and the characterization of their transcriptomes. These developments enabled research on many challenging topics. This Research Topic gives you a primer into them by featuring a broad range of original research contributions on some of the most active areas of ornamental plant research: the genetic basis of flower morphology, scent, and color, the genetic regulation of physiology as well as the epigenetic factors affecting vegetative development. In this context, one of the most significant hurdles to functional genetic studies in ornamentals is achieving efficient genetic transformation. Several articles in this Research Topic describe strategies to tackle this challenge and present insights into the way transgene activity renders novel flower phenotypes.

Flower Development

Flower Development PDF

Author: José Luis Riechmann

Publisher: Springer Nature

Published: 2023-08-04

Total Pages: 586

ISBN-13: 107163299X

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This second edition details new and updated protocols for experimental approaches that are currently used to study the formation of flowers. Chapters guide readers on genetic methods, phenotypic analyses, genome-wide experiments, modeling, and system-wide approaches. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and key tips on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, Flower Development: Methods and Protocols, Second Edition aims to be a useful and practical guide to new researchers and experts looking to expand their knowledge.

RNA-Based Technologies for Functional Genomics in Plants

RNA-Based Technologies for Functional Genomics in Plants PDF

Author: Guiliang Tang

Publisher: Springer Nature

Published: 2021-05-13

Total Pages: 428

ISBN-13: 3030649946

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This book offers a unique and comprehensive overview of key RNA-based technologies, as well as their development and applications for the functional genomics of plant coding and non-coding genes. It focuses on the latest as well as classical RNA-based techniques used for studies on small RNAs, long non-coding RNAs and protein-coding genes. These techniques chiefly focus on target mimics (TMs) and short tandem target mimics (STTMs) for small RNAs, and artificial microRNAs (amiRNAs), RNA interference (RNAi) and CRISPR/Cas for genes. Furthermore, the book discusses the latest trends in the field and various modifications of the above-mentioned approaches, and explores how these RNA-based technologies have been developed, applied and validated as essential technologies in plant functional genomics. RNA-based technologies, their mechanisms of action, their advantages and disadvantages, and insights into the further development and applications of these technologies in plants are discussed. These techniques will enable the users to functionally characterize genes and small RNAs through silencing, overexpression and editing. Gathering contributions by globally respected experts, the book will appeal to students, teachers and scientists in academia and industry who are interested in horticulture, genetics, pathology, entomology, physiology, molecular genetics and breeding, in vitro culture & genetic engineering, and functional genomics.

Molecular Genetics of Plant Development

Molecular Genetics of Plant Development PDF

Author: Stephen Herbert Howell

Publisher: Cambridge University Press

Published: 1998-07-13

Total Pages: 388

ISBN-13: 9780521587846

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The purpose of this book is to present classical plant development in modern, molecular-genetic terms. The study of plant development is rapidly changing as plant genome projects uncover a multitude of new genes. This book provides a framework for integrating gene discovery and genome analysis into the context of plant development. Molecular Genetics of Plant Development is designed to be used as a text-book for upper-division or graduate courses in plant development. The book will also serve as a reference book for scientists in the field of plant molecular biology or plant molecular genetics. The book is also useful for general development courses in which both animal and plant development are presented.

The Molecular Genetics of Floral Transition and Flower Development

The Molecular Genetics of Floral Transition and Flower Development PDF

Author:

Publisher: Elsevier

Published: 2014-06-16

Total Pages: 399

ISBN-13: 0124171818

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Advances in Botanical Research publishes in-depth and up-to-date reviews on a wide range of topics in plant sciences. Currently in its 72nd volume, the series features several reviews by recognized experts on all aspects of plant genetics, biochemistry, cell biology, molecular biology, physiology and ecology. This thematic volume features reviews on the molecular genetics of floral transition and flower development. Publishes in-depth and up-to-date reviews on a wide range of topics in plant sciences Features a wide range of reviews by recognized experts on all aspects of plant genetics, biochemistry, cell biology, molecular biology, physiology and ecology Volume features reviews on the molecular genetics of floral transition and flower development

The Orchid Genome

The Orchid Genome PDF

Author: Fure-Chyi Chen

Publisher: Springer Nature

Published: 2021-04-20

Total Pages: 174

ISBN-13: 3030668266

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This book provides information on genome complexity and evolution, transcriptome analysis, miRNome, simple sequence repeats, genome relationships, molecular cytogenetics, polyploidy induction and application, flower and embryo development. Orchids account for a great part of the worldwide floriculture trade both as cut flowers and as potted plants and are assessed to comprise around 10% of global fresh cut flower trade. A better understanding of the basic botanical characteristics, flower regulation, molecular cytogenetics, karyotypes and DNA content of important orchids will aid in the efficient development of new cultivars. The book also describes the composition, expression and function of various microRNAs and simple sequence repeats. Information on their involvement in all aspects of plant growth and development will aid functional genomics studies.

Plant Functional Genomics

Plant Functional Genomics PDF

Author: Dario Leister

Publisher: CRC Press

Published: 2004-12-28

Total Pages: 728

ISBN-13: 9781560229995

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Discover cutting-edge knowledge for engineering a more productive and environment-friendly agriculture! In Plant Functional Genomics, you’ll find a cross-section of state-of-the-art research on the biological function of plant genes and how they work together in health and disease. World-leading scientists in the field present breakthrough techniques, discuss the results of projects aimed at dissecting particular plant functions, and provide an overview on the state of functional genomics for several plant and plant-related species. With figures, tables, and illustrations, this book will help scientists, researchers, and advanced students in botany find new ways of creating novel plant forms to better serve the needs of a rapidly expanding human population. Plant Functional Genomics will increase your understanding of gene networks and systems rules, as well as gene expression during specific conditions or development or treatments. This important resource contains a wealth of data generated by various plant genome sequencing projects, including the newest results from experiments with Arabidopsis thaliana—the first plant to be completely sequenced. This book also contains innovative research on: T-DNA mutagenesis transcriptomics and metabolic profiling in plants large-scale yeast two-hybrid analyses the exceptional model system of Chlamydomonas genomics functional genomics in rice, maize, and Physcomitrella prospects for functional genomics in a new model grass chloroplast and plant mitochondrial proteomics plant transporters so much more Plant Functional Genomics will help speed up the identification and isolation of genes that might be of interest with respect to diverse biological questions. This valuable contribution to the field clarifies the challenges yet to be faced and the opportunities that could some day expand the frontiers of plant sciences.