Fungal Genomics

Fungal Genomics PDF

Author: Ronald P. de Vries

Publisher: Humana

Published: 2019-06-21

Total Pages: 291

ISBN-13: 9781493992904

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This volume details protocols covering nearly all aspects of fungal genomics. New and updated chapters guide the reader through experimental genomics, biotechnologies, and the analysis and processing of data. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Fungal Genomics : Methods and Protocols, Second Edition aims to ensure successful results in the further study of this vital field.

Fungal Genomics

Fungal Genomics PDF

Author: Jay C. Dunlap

Publisher: Elsevier

Published: 2011-07-29

Total Pages: 320

ISBN-13: 9780080474953

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The sequencing of several fungi genomes has spurred major advances in the field. Fungal genomics has been having a pivotal impact on applied research in agriculture, food sciences, natural resource management, pharmaceuticals, and biotechnology, as well as to basic studies in the life sciences. Fungal Genomics covers exciting new developments in this growth field, from genomic analysis to human fungal pathogen genomics, comparative genomics of fungi, and the genomics of fungal development. Includes information on aspergillus genomes Discusses sex and its role in virulence of human fungal pathogens Covers the genomic analysis of neurospora

Fungal Genomics

Fungal Genomics PDF

Author: Jin-Rong Xu

Publisher: Humana Press

Published: 2016-08-23

Total Pages: 285

ISBN-13: 9781493958177

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Having experienced unprecedented growth since the turn of the millennium, the dramatic expansion of resources and techniques in fungal genomics is poised to fundamentally redefine the study of fungal biology. In Fungal Genomics: Methods and Protocols, expert researchers explore the three most likely fronts upon which the field will advance: the sequencing of more and more fungal genomes, the mining of sequenced genomes for useful information, and most importantly, the use of genomics sequences to provide a foundation for powerful techniques to explain biological processes. Much of the book is dedicated to explaining established and emerging genomics-based technologies in filamentous fungi, including gene expression profiling techniques, techniques for fungal proteomics as well as various case studies that could be adapted to a wide range of fungi. Written in the highly successful Methods in Molecular BiologyTM series format, protocol chapters include brief introductions to their respective topics, lists of the necessary materials and reagents, step-by-step laboratory protocols, and key unpublished tips, potential pitfalls, common mistakes, and special considerations based on the unique experiences of the contributors. Authoritative and cutting-edge, Fungal Genomics: Methods and Protocols provides fungal biologists at any stage of their careers a user-friendly resource for fungal genomics, especially as readers branch out into unfamiliar but exciting new areas of study.

Genomics of Soil- and Plant-Associated Fungi

Genomics of Soil- and Plant-Associated Fungi PDF

Author: Benjamin A. Horwitz

Publisher: Springer Science & Business Media

Published: 2013-08-30

Total Pages: 394

ISBN-13: 364239339X

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This volume addresses the similarities and also the differences in the genomes of soil saprophytes, symbionts, and plant pathogens by using examples of fungal species to illustrate particular principles. It analyzes how the specific interactions with the hosts and the influence of the environment may have shaped genome evolution. The relevance of fungal genetic research and biotechnological applications is shown for areas such as plant pathogenesis, biomass degradation, litter decomposition, nitrogen assimilation, antibiotic production, mycoparasitism, energy, ecology, and also for soil fungi turning to human pathogens. In addition to the model organisms Neurospora and Aspergillus, the following species are covered providing a view of pathogens and mutualists: Trichoderma, Fusarium oxysporum, Cochliobolus heterostrophus, Penicillium chrysogenum, Rhizopus oryzae, Podospora anserina, and species belonging to Agaricomycetes, Archaeorhizomycetes and Magnaporthaceae. Ecology and potential applications have guided the choice of fungal genes to be studied and it will be fascinating to follow the trends of future sequencing projects.

The Ecological Genomics of Fungi

The Ecological Genomics of Fungi PDF

Author: Francis Martin

Publisher: John Wiley & Sons

Published: 2013-12-31

Total Pages: 0

ISBN-13: 1119946107

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This unique book covers a broad diversity of fungal systems and provides unique insight into the functions of those fungi in various ecosystems – from soil, to plant, to human. Bringing together fungal genomic information on a variety of lifestyles and traits, the book covers saprotrophism, pathogenesis (including biotrophs, hemibiotrophs, necrotrophs) and symbiosis. Advances in high-throughput sequencing now offer unprecedented opportunities for identification of novel key molecular mechanisms controlling plant-microbe interactions, evolution of fungi and developmentally- and ecologically-relevant traits, this book explores how these massive streams of fungal sequences can be exploited to gain a deeper understanding of the evolution of fungi and their ecological role. Although tremendous progress has been made in recent years in fungal genomics, thanks to the sequencing of over one hundred fungal genomes, until now no book has used this information to bridge fungal genomics, molecular ecology and ecology. Edited by a recognized leader in fungal genomics and soil metagenomics with over a decade of experience, Genomics & Metagenomics for Harnessing the Ecology of Fungi will be a useful resource for the experienced as well as the new researchers entering the field.

Fungal Genetics

Fungal Genetics PDF

Author: Cees Bos

Publisher: CRC Press

Published: 2020-11-25

Total Pages: 460

ISBN-13: 1000148920

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This is a concise guide to the combined use of classical and molecular methods for the genetic analysis and breeding of fungi. It presents basic concepts and experimental designs, and demonstrates the power of fungal genetics for applied research in biotechnology and phytopathology. Case studies of Saccharomyces cerevisiae, Candida albicans, Aspergillus niger, Neurospora crassa, Podospora anserina, Phytophthora infestans and others are included.

Genomics of Plants and Fungi

Genomics of Plants and Fungi PDF

Author: Rolf A. Prade

Publisher: CRC Press

Published: 2003-04-30

Total Pages: 396

ISBN-13: 0824748565

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Provides insight on how genomics-oriented studies may be used to bring understanding to established models of fungal development; assess and solve problems associated with multiple copies of genes and proteins with seemingly identical functions; and depict industrial and economic applications.

Essential Fungal Genetics

Essential Fungal Genetics PDF

Author: David Moore

Publisher: Springer Science & Business Media

Published: 2007-06-14

Total Pages: 369

ISBN-13: 0387224572

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Most genetics textbooks deal adequately with plant and animal genetics, but tend to neglect fungi. The authors have produced a book that will compensate for this imbalance. This book discusses the genetics of fungi in a way that is attractive and challenging, succinct yet comprehensive, sensitive to commercial and applied aspects, yet also theoretical, dealing with their genetics from molecules to individuals to population. This short text will be an ideal supplement to the established basic genetics texts or can be used as the sole text for an advanced course devoted to fungal genetics.

Applied Mycology

Applied Mycology PDF

Author: Mahendra Rai

Publisher: CABI

Published: 2009

Total Pages: 332

ISBN-13: 1845935349

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The fungal kingdom consists of a wide variety of organisms with a diverse range of forms and functions. Fungi have been utilized for thousands of years and their importance in agriculture, medicine, food production and the environmental sciences is well known. New advances in genomic and metabolomic technologies have allowed further developments in the use of fungi in industry and medicine, increasing the need for a compilation of new applications, developments and technologies across the mycological field. Applied Mycology brings together a range of contributions, highlighting the diverse nature of current research. Chapters include discussions of fungal associations in the environment, agriculture and forestry, long established and novel applications of fungi in fermentation, the use of fungi in the pharmaceutical industry, the growing recognition of fungal infections, current interests in the use fungal enzymes in biotechnology and the new and emerging field of myconanotechnology. Demonstrating the broad coverage and importance of mycological research, this book will be of interest to researchers and students in all biological sciences.