Microbial Evolution

Microbial Evolution PDF

Author: Howard Ochman

Publisher:

Published: 2016

Total Pages: 0

ISBN-13: 9781621820376

DOWNLOAD EBOOK →

Bacteria have been the dominant forms of life on Earth for the past 3.5 billion years. They rapidly evolve, constantly changing their genetic architecture through horizontal DNA transfer and other mechanisms. Consequently, it can be difficult to define individual species and determine how they are related. Written and edited by experts in the field, this collection from Cold Spring Harbor Perspectives in Biology examines how bacteria and other microbes evolve, focusing on insights from genomics-based studies. Contributors discuss the origins of new microbial populations, the evolutionary and ecological mechanisms that keep species separate once they have diverged, and the challenges of constructing phylogenetic trees that accurately reflect their relationships. They describe the organization of microbial genomes, the various mutations that occur, including the birth of new genes de novo and by duplication, and how natural selection acts on those changes. The role of horizontal gene transfer as a strong driver of microbial evolution is emphasized throughout. The authors also explore the geologic evidence for early microbial evolution and describe the use of microbial evolution experiments to examine phenomena like natural selection. This volume will thus be essential reading for all microbial ecologists, population geneticists, and evolutionary biologists.

Evolution of Microbial Life

Evolution of Microbial Life PDF

Author: Society for General Microbiology. Symposium

Publisher: Cambridge University Press

Published: 1996-11-13

Total Pages: 318

ISBN-13: 9780521564328

DOWNLOAD EBOOK →

This volume considers the evolution and diversification of early unicellular life.

Microbial Life History

Microbial Life History PDF

Author: Steven A. Frank

Publisher: Princeton University Press

Published: 2022-08-16

Total Pages: 400

ISBN-13: 0691231184

DOWNLOAD EBOOK →

A powerful framework for understanding how natural selection shapes adaptation and biological design Design and diversity are the two great challenges in the study of life. Microbial Life History draws on the latest advances in microbiology to describe the fundamental forces of biological design and apply these evolutionary processes to a broad diversity of traits in microbial metabolism and biochemistry. Emphasizing how to formulate and test hypotheses of adaptation, Steven Frank provides a new foundation for exploring the evolutionary forces of design. He discusses the economic principles of marginal valuations, trade-offs, and payoffs in risky and random environments; the social aspects of conflict and cooperation; the demographic aspects of age and spatial heterogeneity; and the engineering control theory principles by which systems adjust to environments. Frank then applies these evolutionary principles to the biochemistry of microbial metabolism, providing the first comprehensive link between the forces that shape biological design and cellular energetics. Tracing how natural selection sculpts metabolism, Microbial Life History provides new perspectives on the life histories of organisms, from growth rate and survival to dispersal and defense against attack. Along the way, this incisive book addresses the conceptual and philosophical challenges confronting evolutionary biologists and other practitioners who study biological design and seek to apply its lessons.

Microbial Evolution and Co-Adaptation

Microbial Evolution and Co-Adaptation PDF

Author: Institute of Medicine

Publisher: National Academies Press

Published: 2009-05-10

Total Pages: 330

ISBN-13: 0309131219

DOWNLOAD EBOOK →

Dr. Joshua Lederberg - scientist, Nobel laureate, visionary thinker, and friend of the Forum on Microbial Threats - died on February 2, 2008. It was in his honor that the Institute of Medicine's Forum on Microbial Threats convened a public workshop on May 20-21, 2008, to examine Dr. Lederberg's scientific and policy contributions to the marketplace of ideas in the life sciences, medicine, and public policy. The resulting workshop summary, Microbial Evolution and Co-Adaptation, demonstrates the extent to which conceptual and technological developments have, within a few short years, advanced our collective understanding of the microbiome, microbial genetics, microbial communities, and microbe-host-environment interactions.

Links Between Geological Processes, Microbial Activities & Evolution of Life

Links Between Geological Processes, Microbial Activities & Evolution of Life PDF

Author: Yildirim Dilek

Publisher: Springer Science & Business Media

Published: 2008-07-01

Total Pages: 359

ISBN-13: 1402083068

DOWNLOAD EBOOK →

Microbial systems in extreme environments and in the deep biosphere may be analogous to potential life on other planetary bodies and hence may be used to investigate the possibilities of extraterrestrial life. This book examines the mode and nature of links between geological processes and microbial activities and their significance for the origin and evolution of life on the Earth and possibly on other planets. This is a truly interdisciplinary science with societal relevance.

Microbial Life

Microbial Life PDF

Author: James T. Staley

Publisher: Sinauer Associates, Incorporated

Published: 2007

Total Pages: 0

ISBN-13: 9780878936854

DOWNLOAD EBOOK →

Special features of this second edition are: complete coverage of all aspects of microbiology; a newly updated and expanded treatment of microbial physiology and metabolism; a completely new approach to presenting the biology of eukaryotic microorganisms; updated information on genetics and genomics; a more extensive, phylogenetic approach to microbial diversity; a revised up-to-date section on microbial structure and function that reflects current concepts and techniques; expanded treatment of microbial diseases; recent information about the taxonomy, evolution, and speciation of Bacteria and Archaea; a new section on energetics covering both chemical and light energy conservation; expanded and updated treatment of immunology; chapters on the popular area of beneficial symbioses and on human host-microbe interactions; separate chapters on industrial microbiology and applied and environmental microbiology.

Life's Engines

Life's Engines PDF

Author: Paul G. Falkowski

Publisher: Princeton University Press

Published: 2023-06-13

Total Pages: 224

ISBN-13: 0691247692

DOWNLOAD EBOOK →

The marvelous microbes that made life on Earth possible and support our very existence For almost four billion years, microbes had the primordial oceans all to themselves. The stewards of Earth, these organisms transformed the chemistry of our planet to make it habitable for plants, animals, and us. Life's Engines takes readers deep into the microscopic world to explore how these marvelous creatures made life on Earth possible—and how human life today would cease to exist without them. Paul Falkowski looks "under the hood" of microbes to find the engines of life, the actual working parts that do the biochemical heavy lifting for every living organism on Earth. With insight and humor, he explains how these miniature engines are built—and how they have been appropriated by and assembled like Lego sets within every creature that walks, swims, or flies. Falkowski shows how evolution works to maintain this core machinery of life, and how we and other animals are veritable conglomerations of microbes. A vibrantly entertaining book about the microbes that support our very existence, Life's Engines will inspire wonder about these elegantly complex nanomachines that have driven life since its origin. It also issues a timely warning about the dangers of tinkering with that machinery to make it more "efficient" at meeting the ever-growing demands of humans in the coming century.

The New Science of Metagenomics

The New Science of Metagenomics PDF

Author: National Research Council

Publisher: National Academies Press

Published: 2007-06-24

Total Pages: 170

ISBN-13: 0309106761

DOWNLOAD EBOOK →

Although we can't usually see them, microbes are essential for every part of human life-indeed all life on Earth. The emerging field of metagenomics offers a new way of exploring the microbial world that will transform modern microbiology and lead to practical applications in medicine, agriculture, alternative energy, environmental remediation, and many others areas. Metagenomics allows researchers to look at the genomes of all of the microbes in an environment at once, providing a "meta" view of the whole microbial community and the complex interactions within it. It's a quantum leap beyond traditional research techniques that rely on studying-one at a time-the few microbes that can be grown in the laboratory. At the request of the National Science Foundation, five Institutes of the National Institutes of Health, and the Department of Energy, the National Research Council organized a committee to address the current state of metagenomics and identify obstacles current researchers are facing in order to determine how to best support the field and encourage its success. The New Science of Metagenomics recommends the establishment of a "Global Metagenomics Initiative" comprising a small number of large-scale metagenomics projects as well as many medium- and small-scale projects to advance the technology and develop the standard practices needed to advance the field. The report also addresses database needs, methodological challenges, and the importance of interdisciplinary collaboration in supporting this new field.

Evolution of Microbial Life

Evolution of Microbial Life PDF

Author: D. McL. Roberts

Publisher: Cambridge University Press

Published: 1996-11-13

Total Pages: 313

ISBN-13: 9780521564328

DOWNLOAD EBOOK →

It is now accepted that microbial life followed very quickly after the formation of liquid water on the early earth, and that for the next 3,000 million years life was a unicellular phenomenon. During this immense period of time all the major types of microbes appeared, as did all the fundamental chemical pathways necessary for life. This diversification was not appreciated until the techniques of molecular biology provided a means to examine the relationships among microorganisms that share few, if any, phenotypic characteristics. This volume reviews the current understanding of the evolution of microbial life during that time. The chapters draw together the various threads of the story to reveal what has been learned about the process of evolution itself and how this knowledge can contribute to our understanding of biodiversity.

Microbial Evolution under Extreme Conditions

Microbial Evolution under Extreme Conditions PDF

Author: Corien Bakermans

Publisher: Walter de Gruyter GmbH & Co KG

Published: 2015-03-10

Total Pages: 290

ISBN-13: 3110340712

DOWNLOAD EBOOK →

Today's microorganisms represent the vast majority of biodiversity on Earth and have survived nearly 4 billion years of evolutionary change. However, we still know little about the processes of evolution as applied to microorganisms and microbial populations. Microbial evolution occurred and continues to take place in a vast variety of environmental conditions that range from anoxic to oxic, from hot to cold, from free-living to symbiotic, etc. Some of these physicochemical conditions are considered "extreme", particularly when inhabitants are limited to microorganisms. It is easy to imagine that microbial life in extreme environments is somehow more constrained and perhaps subjected to different evolutionary pressures. But what do we actually know about microbial evolution under extreme conditions and how can we apply that knowledge to other conditions? Appealingly, extreme environments with their relatively limited numbers of inhabitants can serve as good model systems for the study of evolutionary processes. A look at the microbial inhabitants of today's extreme environments provides a snapshot in time of evolution and adaptation to extreme conditions. These adaptations manifest at different levels from established communities and species to genome content and changes in specific genes that result in altered function or gene expression. But as a recent (2011) report from the American Academy of Microbiology observes: "A complex issue in the study of microbial evolution is unraveling the process of evolution from that of adaptation. In many cases, microbes have the capacity to adapt to various environmental changes by changing gene expression or community composition as opposed to having to evolve entirely new capabilities." We have learned much about how microbes are adapted to extreme conditions but relatively little is known about these adaptations evolved. How did the different processes of evolution such as mutation, immigration, horizontal (lateral) gene transfer, recombination, hybridization, genetic drift, fixation, positive and negative selection, and selective screens contribute to the evolution of these genes, genomes, microbial species, communities, and functions? What are typical rates of these processes? How prevalent are each of these processes under different conditions? This book explores the current state of knowledge about microbial evolution under extreme conditions and addresses the following questions: What is known about the processes of microbial evolution (mechanisms, rates, etc.) under extreme conditions? Can this knowledge be applied to other systems and what is the broader relevance? What remains unknown and requires future research? These questions will be addressed from several perspectives including different extreme environments, specific organisms, and specific evolutionary processes.